STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccnt1Cyclin-T1; Belongs to the cyclin family. (711 aa)    
Predicted Functional Partners:
CDK9
Cell division protein kinase 9; Belongs to the protein kinase superfamily.
   
 0.996
Aff4
AF4/FMR2 family member 4.
   
 0.961
Aff1
AF4/FMR2 family member 1.
   
 0.829
Brd4
Bromodomain-containing protein 4.
   
 
 0.802
GW7_09875
Cell division cycle 2-like protein kinase 5.
   
 0.799
CDK12
Cell division cycle 2-related protein kinase 7.
   
 0.799
Larp7
La-related protein 7.
   
 0.793
GW7_18776
RNA polymerase II elongation factor ELL3.
    
 0.717
Ell
RNA polymerase II elongation factor ELL.
    
 0.703
Cdk7
Cell division protein kinase 7.
   
 
 0.691
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.