STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_08573Seryl-tRNA synthetase, cytoplasmic. (104 aa)    
Predicted Functional Partners:
GW7_11504
Tyrosine--tRNA ligase.
  
  
 0.868
GW7_21726
Glycyl-tRNA synthetase.
   
  
 0.866
Yars
Tyrosyl-tRNA synthetase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.847
Eprs
Bifunctional aminoacyl-tRNA synthetase.
  
 
 0.820
GW7_04793
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.818
SGF29
SAGA-associated factor 29-like protein.
    
 
 0.767
Taf10
Transcription initiation factor TFIID subunit 10.
   
 
 0.760
Wars
Tryptophanyl-tRNA synthetase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.750
TADA3
Transcriptional adapter 3-like protein.
    
 
 0.731
Trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.718
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.