STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SlirpSRA stem-loop-interacting RNA-binding protein, mitochondrial. (91 aa)    
Predicted Functional Partners:
Lrpprc
Leucine-rich PPR motif-containing protein, mitochondrial.
   
 
 0.652
GW7_00108
Leucine-rich PPR motif-containing protein, mitochondrial.
   
 
 0.652
GW7_13996
Leucine-rich PPR motif-containing protein, mitochondrial.
   
 
 0.652
NDUFB4
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex subunit 4 isoform 2.
   
    0.631
Tomm7
Mitochondrial import receptor subunit TOM7-like protein.
   
  
 0.628
Snrpg
Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.
   
 0.623
Ndufc1
NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial.
   
    0.609
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.600
Snw1
SNW domain-containing protein 1.
   
 
 0.494
GW7_00758
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.486
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.