Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cxxc1 | Dpy30 | G5BVS6 | G5B3Y7 | CpG-binding protein. | Dpy-30-like protein. | 0.946 |
Cxxc1 | GW7_01217 | G5BVS6 | G5B0A3 | CpG-binding protein. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.994 |
Cxxc1 | GW7_03113 | G5BVS6 | G5AWN7 | CpG-binding protein. | Histone-lysine N-methyltransferase SETD1B. | 0.945 |
Cxxc1 | GW7_06374 | G5BVS6 | G5AR15 | CpG-binding protein. | WD repeat-containing protein 82. | 0.939 |
Cxxc1 | GW7_10006 | G5BVS6 | G5BSF5 | CpG-binding protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.511 |
Cxxc1 | GW7_13705 | G5BVS6 | G5C2R5 | CpG-binding protein. | Host cell factor. | 0.728 |
Cxxc1 | GW7_15992 | G5BVS6 | G5B2D6 | CpG-binding protein. | Retinoblastoma-binding protein 5. | 0.994 |
Cxxc1 | HIST1H4I | G5BVS6 | G5BKL3 | CpG-binding protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.511 |
Cxxc1 | RPS27A | G5BVS6 | G5B8W4 | CpG-binding protein. | Ubiquitin-40S ribosomal protein S27a. | 0.593 |
Cxxc1 | Wdr82 | G5BVS6 | G5AXM6 | CpG-binding protein. | WD repeat-containing protein 82. | 0.939 |
Dpy30 | Cxxc1 | G5B3Y7 | G5BVS6 | Dpy-30-like protein. | CpG-binding protein. | 0.946 |
Dpy30 | GW7_01217 | G5B3Y7 | G5B0A3 | Dpy-30-like protein. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.996 |
Dpy30 | GW7_03113 | G5B3Y7 | G5AWN7 | Dpy-30-like protein. | Histone-lysine N-methyltransferase SETD1B. | 0.945 |
Dpy30 | GW7_06374 | G5B3Y7 | G5AR15 | Dpy-30-like protein. | WD repeat-containing protein 82. | 0.847 |
Dpy30 | GW7_10006 | G5B3Y7 | G5BSF5 | Dpy-30-like protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.750 |
Dpy30 | GW7_13705 | G5B3Y7 | G5C2R5 | Dpy-30-like protein. | Host cell factor. | 0.783 |
Dpy30 | GW7_15992 | G5B3Y7 | G5B2D6 | Dpy-30-like protein. | Retinoblastoma-binding protein 5. | 0.996 |
Dpy30 | HIST1H4I | G5B3Y7 | G5BKL3 | Dpy-30-like protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.750 |
Dpy30 | RPS27A | G5B3Y7 | G5B8W4 | Dpy-30-like protein. | Ubiquitin-40S ribosomal protein S27a. | 0.845 |
Dpy30 | Wdr82 | G5B3Y7 | G5AXM6 | Dpy-30-like protein. | WD repeat-containing protein 82. | 0.847 |
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