Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GW7_01217 | GW7_03919 | G5B0A3 | G5BCN7 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Lysine-specific demethylase 6A. | 0.950 |
GW7_01217 | GW7_13842 | G5B0A3 | G5B5E0 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Lysine-specific demethylase 6B. | 0.948 |
GW7_01217 | GW7_15992 | G5B0A3 | G5B2D6 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Retinoblastoma-binding protein 5. | 0.999 |
GW7_01217 | Kdm6a | G5B0A3 | G5BKE2 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Lysine-specific demethylase 6A. | 0.956 |
GW7_01217 | Krt27 | G5B0A3 | G5AX68 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Keratin, type I cytoskeletal 27; Belongs to the intermediate filament family. | 0.421 |
GW7_01217 | Krt28 | G5B0A3 | G5AX67 | Set1/Ash2 histone methyltransferase complex subunit ASH2. | Keratin, type I cytoskeletal 28; Belongs to the intermediate filament family. | 0.421 |
GW7_03919 | GW7_01217 | G5BCN7 | G5B0A3 | Lysine-specific demethylase 6A. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.950 |
GW7_03919 | GW7_05154 | G5BCN7 | G5CB92 | Lysine-specific demethylase 6A. | E3 SUMO-protein ligase RanBP2. | 0.683 |
GW7_03919 | GW7_15992 | G5BCN7 | G5B2D6 | Lysine-specific demethylase 6A. | Retinoblastoma-binding protein 5. | 0.948 |
GW7_03919 | Krt27 | G5BCN7 | G5AX68 | Lysine-specific demethylase 6A. | Keratin, type I cytoskeletal 27; Belongs to the intermediate filament family. | 0.407 |
GW7_03919 | Krt28 | G5BCN7 | G5AX67 | Lysine-specific demethylase 6A. | Keratin, type I cytoskeletal 28; Belongs to the intermediate filament family. | 0.407 |
GW7_05154 | GW7_03919 | G5CB92 | G5BCN7 | E3 SUMO-protein ligase RanBP2. | Lysine-specific demethylase 6A. | 0.683 |
GW7_05154 | GW7_13842 | G5CB92 | G5B5E0 | E3 SUMO-protein ligase RanBP2. | Lysine-specific demethylase 6B. | 0.692 |
GW7_05154 | Kdm6a | G5CB92 | G5BKE2 | E3 SUMO-protein ligase RanBP2. | Lysine-specific demethylase 6A. | 0.696 |
GW7_05154 | Krt27 | G5CB92 | G5AX68 | E3 SUMO-protein ligase RanBP2. | Keratin, type I cytoskeletal 27; Belongs to the intermediate filament family. | 0.499 |
GW7_05154 | Krt28 | G5CB92 | G5AX67 | E3 SUMO-protein ligase RanBP2. | Keratin, type I cytoskeletal 28; Belongs to the intermediate filament family. | 0.499 |
GW7_13842 | GW7_01217 | G5B5E0 | G5B0A3 | Lysine-specific demethylase 6B. | Set1/Ash2 histone methyltransferase complex subunit ASH2. | 0.948 |
GW7_13842 | GW7_05154 | G5B5E0 | G5CB92 | Lysine-specific demethylase 6B. | E3 SUMO-protein ligase RanBP2. | 0.692 |
GW7_13842 | GW7_15992 | G5B5E0 | G5B2D6 | Lysine-specific demethylase 6B. | Retinoblastoma-binding protein 5. | 0.955 |
GW7_13842 | Krt27 | G5B5E0 | G5AX68 | Lysine-specific demethylase 6B. | Keratin, type I cytoskeletal 27; Belongs to the intermediate filament family. | 0.415 |
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