STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trappc13Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
GW7_02297
Tetratricopeptide repeat protein 15.
    
 0.985
Trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.978
Trappc11
Uncharacterized protein.
   
 0.970
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein.
    
 0.965
GW7_07354
Trafficking protein particle complex subunit 6B.
   
 0.965
Trappc8
TRS85-like protein.
   
 0.964
GW7_10232
Trafficking protein particle complex subunit 2.
   
 0.961
GW7_06821
Trafficking protein particle complex subunit 10.
     
 0.959
GW7_10494
Trafficking protein particle complex subunit 9.
     
 0.946
GW7_18150
Trafficking protein particle complex subunit 6A.
   
 0.825
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.