STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_20211UPF0611 protein FAM169A. (272 aa)    
Predicted Functional Partners:
GW7_06777
Lamin-B2; Belongs to the intermediate filament family.
   
 0.753
GW7_03112
Rho-related GTP-binding protein RhoF.
   
 0.580
Gosr1
Golgi SNAP receptor complex member 1.
   
 0.574
GW7_07916
General vesicular transport factor p115.
   
 0.569
STX5
Syntaxin-5 isoform 1; Belongs to the syntaxin family.
    
 0.559
Ckap5
Cytoskeleton-associated protein 5.
   
 0.536
Tubgcp2
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
 
 0.526
Wdr17
WD repeat-containing protein 17.
    
 
 0.507
CLPTM1L
Cleft lip and palate transmembrane protein 1-like protein.
    
 0.471
Sec22c
Vesicle-trafficking protein SEC22c; Belongs to the synaptobrevin family.
    
 
 0.469
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.