STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM9SF1Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (606 aa)    
Predicted Functional Partners:
Chmp2a
Charged multivesicular body protein 2a.
   
 0.879
Chmp3
Charged multivesicular body protein 3.
   
 0.863
GW7_17263
Tyrosine-protein phosphatase non-receptor type 23.
   
 0.843
SNF8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
    
 0.830
Ist1
IST1-like protein.
    
 0.788
CHMP6
Charged multivesicular body protein 6.
    
 0.768
GW7_08152
Protein Njmu-R1.
    
 0.768
GW7_18013
Charged multivesicular body protein 5.
   
 0.756
GW7_09946
Charged multivesicular body protein 5.
   
 0.756
Vps4a
Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.
   
 0.728
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.