Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arntl | BHLHE40 | G5C7T1 | G5B3I0 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Class E basic helix-loop-helix protein 40. | 0.718 |
Arntl | Bhlhe41 | G5C7T1 | G5BQA4 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Class E basic helix-loop-helix protein 41. | 0.740 |
Arntl | GW7_13241 | G5C7T1 | G5B794 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Neuronal PAS domain-containing protein 2. | 0.982 |
Arntl | GW7_18853 | G5C7T1 | G5C792 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Nuclear receptor ROR-beta. | 0.693 |
Arntl | GW7_19190 | G5C7T1 | G5C454 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Cryptochrome-1. | 0.990 |
Arntl | NFIL3 | G5C7T1 | G5C2H2 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Nuclear factor interleukin-3-regulated protein. | 0.738 |
Arntl | PER1 | G5C7T1 | G5B5F2 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Period circadian protein-like protein 1. | 0.975 |
Arntl | Per2 | G5C7T1 | G5BHH6 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Period circadian protein-like protein 2. | 0.997 |
Arntl | Rora | G5C7T1 | G5AWB8 | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | Nuclear receptor ROR-alpha. | 0.705 |
BHLHE40 | Arntl | G5B3I0 | G5C7T1 | Class E basic helix-loop-helix protein 40. | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | 0.718 |
BHLHE40 | Bhlhe41 | G5B3I0 | G5BQA4 | Class E basic helix-loop-helix protein 40. | Class E basic helix-loop-helix protein 41. | 0.926 |
BHLHE40 | GW7_13241 | G5B3I0 | G5B794 | Class E basic helix-loop-helix protein 40. | Neuronal PAS domain-containing protein 2. | 0.522 |
BHLHE40 | GW7_18853 | G5B3I0 | G5C792 | Class E basic helix-loop-helix protein 40. | Nuclear receptor ROR-beta. | 0.531 |
BHLHE40 | GW7_19190 | G5B3I0 | G5C454 | Class E basic helix-loop-helix protein 40. | Cryptochrome-1. | 0.645 |
BHLHE40 | NFIL3 | G5B3I0 | G5C2H2 | Class E basic helix-loop-helix protein 40. | Nuclear factor interleukin-3-regulated protein. | 0.620 |
BHLHE40 | PER1 | G5B3I0 | G5B5F2 | Class E basic helix-loop-helix protein 40. | Period circadian protein-like protein 1. | 0.544 |
BHLHE40 | Per2 | G5B3I0 | G5BHH6 | Class E basic helix-loop-helix protein 40. | Period circadian protein-like protein 2. | 0.707 |
BHLHE40 | Psmb2 | G5B3I0 | G5C6E5 | Class E basic helix-loop-helix protein 40. | Proteasome subunit beta. | 0.579 |
BHLHE40 | Rora | G5B3I0 | G5AWB8 | Class E basic helix-loop-helix protein 40. | Nuclear receptor ROR-alpha. | 0.547 |
Bhlhe41 | Arntl | G5BQA4 | G5C7T1 | Class E basic helix-loop-helix protein 41. | Aryl hydrocarbon receptor nuclear translocator-like protein 1. | 0.740 |
page 1 of 5