Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arl1 | Cog8 | G5BBI9 | G5AK46 | ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. | Conserved oligomeric Golgi complex subunit 8. | 0.796 |
Arl1 | Rab36 | G5BBI9 | G5B624 | ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. | Ras-related protein Rab-36. | 0.720 |
Arl1 | Ric1 | G5BBI9 | G5B6S4 | ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. | RIC1-like protein. | 0.631 |
Arl1 | Vps52 | G5BBI9 | G5BAZ5 | ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. | Vacuolar protein sorting-associated protein 52-like protein. | 0.667 |
Arl1 | Vps53 | G5BBI9 | G5BVK7 | ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. | Vacuolar protein sorting-associated protein 53-like protein. | 0.745 |
Cog8 | Arl1 | G5AK46 | G5BBI9 | Conserved oligomeric Golgi complex subunit 8. | ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. | 0.796 |
Cog8 | Rab36 | G5AK46 | G5B624 | Conserved oligomeric Golgi complex subunit 8. | Ras-related protein Rab-36. | 0.715 |
Cog8 | Ric1 | G5AK46 | G5B6S4 | Conserved oligomeric Golgi complex subunit 8. | RIC1-like protein. | 0.780 |
Cog8 | Vps52 | G5AK46 | G5BAZ5 | Conserved oligomeric Golgi complex subunit 8. | Vacuolar protein sorting-associated protein 52-like protein. | 0.892 |
Cog8 | Vps53 | G5AK46 | G5BVK7 | Conserved oligomeric Golgi complex subunit 8. | Vacuolar protein sorting-associated protein 53-like protein. | 0.896 |
GW7_04360 | Rab36 | G5AQH2 | G5B624 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Ras-related protein Rab-36. | 0.687 |
GW7_04360 | Ric1 | G5AQH2 | G5B6S4 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | RIC1-like protein. | 0.469 |
GW7_15308 | Pld2 | G5B8R1 | G5BWA3 | Bifunctional polynucleotide phosphatase/kinase. | Phospholipase. | 0.685 |
GW7_15308 | Rab36 | G5B8R1 | G5B624 | Bifunctional polynucleotide phosphatase/kinase. | Ras-related protein Rab-36. | 0.664 |
GW7_15308 | Vps53 | G5B8R1 | G5BVK7 | Bifunctional polynucleotide phosphatase/kinase. | Vacuolar protein sorting-associated protein 53-like protein. | 0.599 |
Gdi1 | Rab36 | G5BFK9 | G5B624 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Ras-related protein Rab-36. | 0.687 |
Gdi1 | Ric1 | G5BFK9 | G5B6S4 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | RIC1-like protein. | 0.469 |
Gdi2 | Rab36 | G5B3J1 | G5B624 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Ras-related protein Rab-36. | 0.687 |
Gdi2 | Ric1 | G5B3J1 | G5B6S4 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | RIC1-like protein. | 0.469 |
Pld2 | GW7_15308 | G5BWA3 | G5B8R1 | Phospholipase. | Bifunctional polynucleotide phosphatase/kinase. | 0.685 |
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