Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atl1 | Rtn3 | G5BLN1 | G5B6G5 | Atlastin-1. | Reticulon. | 0.550 |
Atl1 | Rtn4 | G5BLN1 | G5B8W2 | Atlastin-1. | Reticulon. | 0.529 |
Bace1 | Bace2 | G5BHK2 | G5C5D1 | Beta-secretase 1; Belongs to the peptidase A1 family. | Beta-secretase 2; Belongs to the peptidase A1 family. | 0.901 |
Bace1 | Rtn3 | G5BHK2 | G5B6G5 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.961 |
Bace1 | Rtn4 | G5BHK2 | G5B8W2 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.964 |
Bace2 | Bace1 | G5C5D1 | G5BHK2 | Beta-secretase 2; Belongs to the peptidase A1 family. | Beta-secretase 1; Belongs to the peptidase A1 family. | 0.901 |
Bace2 | Rtn3 | G5C5D1 | G5B6G5 | Beta-secretase 2; Belongs to the peptidase A1 family. | Reticulon. | 0.942 |
Bace2 | Rtn4 | G5C5D1 | G5B8W2 | Beta-secretase 2; Belongs to the peptidase A1 family. | Reticulon. | 0.938 |
GW7_09782 | Rtn3 | G5C288 | G5B6G5 | Translocation protein SEC63-like protein. | Reticulon. | 0.700 |
GW7_09782 | Rtn4 | G5C288 | G5B8W2 | Translocation protein SEC63-like protein. | Reticulon. | 0.700 |
GW7_16977 | Rtn3 | G5BF79 | G5B6G5 | GTP cyclohydrolase 1. | Reticulon. | 0.602 |
GW7_16977 | Rtn4 | G5BF79 | G5B8W2 | GTP cyclohydrolase 1. | Reticulon. | 0.602 |
GW7_16977 | VTA1 | G5BF79 | G5ANT4 | GTP cyclohydrolase 1. | Vacuolar protein sorting-associated protein VTA1-like protein. | 0.946 |
GW7_17283 | GW7_20695 | G5BW48 | G5B6G6 | Receptor expression-enhancing protein 6. | Atlastin-3. | 0.418 |
GW7_17283 | Rtn3 | G5BW48 | G5B6G5 | Receptor expression-enhancing protein 6. | Reticulon. | 0.537 |
GW7_17283 | Rtn4 | G5BW48 | G5B8W2 | Receptor expression-enhancing protein 6. | Reticulon. | 0.537 |
GW7_20695 | GW7_17283 | G5B6G6 | G5BW48 | Atlastin-3. | Receptor expression-enhancing protein 6. | 0.418 |
GW7_20695 | Rtn3 | G5B6G6 | G5B6G5 | Atlastin-3. | Reticulon. | 0.637 |
GW7_20695 | Rtn4 | G5B6G6 | G5B8W2 | Atlastin-3. | Reticulon. | 0.556 |
Reep5 | Rtn3 | G5BA34 | G5B6G5 | Receptor expression-enhancing protein. | Reticulon. | 0.560 |
page 1 of 3