Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Amph | Bin1 | G5B6T9 | G5BGN8 | Amphiphysin. | Myc box-dependent-interacting protein 1. | 0.991 |
Amph | Dnm1 | G5B6T9 | G5ASF4 | Amphiphysin. | Dynamin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.928 |
Amph | Dnm2 | G5B6T9 | G5BUH8 | Amphiphysin. | Dynamin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.954 |
Amph | GW7_01835 | G5B6T9 | G5C053 | Amphiphysin. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.732 |
Amph | GW7_08300 | G5B6T9 | G5C895 | Amphiphysin. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.770 |
Amph | GW7_12697 | G5B6T9 | G5C8F7 | Amphiphysin. | AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] | 0.698 |
Amph | GW7_20074 | G5B6T9 | G5BJH7 | Amphiphysin. | Wiskott-Aldrich syndrome protein. | 0.707 |
Amph | Myc | G5B6T9 | G5B9M9 | Amphiphysin. | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. | 0.771 |
Amph | Synj1 | G5B6T9 | G5BE96 | Amphiphysin. | Synaptojanin-1. | 0.715 |
Amph | Wasl | G5B6T9 | G5BZQ2 | Amphiphysin. | Neural Wiskott-Aldrich syndrome protein. | 0.738 |
Bin1 | Amph | G5BGN8 | G5B6T9 | Myc box-dependent-interacting protein 1. | Amphiphysin. | 0.991 |
Bin1 | Dnm1 | G5BGN8 | G5ASF4 | Myc box-dependent-interacting protein 1. | Dynamin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.773 |
Bin1 | Dnm2 | G5BGN8 | G5BUH8 | Myc box-dependent-interacting protein 1. | Dynamin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.940 |
Bin1 | GW7_01835 | G5BGN8 | G5C053 | Myc box-dependent-interacting protein 1. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.729 |
Bin1 | GW7_08300 | G5BGN8 | G5C895 | Myc box-dependent-interacting protein 1. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.764 |
Bin1 | GW7_12697 | G5BGN8 | G5C8F7 | Myc box-dependent-interacting protein 1. | AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] | 0.572 |
Bin1 | GW7_20074 | G5BGN8 | G5BJH7 | Myc box-dependent-interacting protein 1. | Wiskott-Aldrich syndrome protein. | 0.695 |
Bin1 | Myc | G5BGN8 | G5B9M9 | Myc box-dependent-interacting protein 1. | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. | 0.946 |
Bin1 | Synj1 | G5BGN8 | G5BE96 | Myc box-dependent-interacting protein 1. | Synaptojanin-1. | 0.713 |
Bin1 | Wasl | G5BGN8 | G5BZQ2 | Myc box-dependent-interacting protein 1. | Neural Wiskott-Aldrich syndrome protein. | 0.702 |
page 1 of 5