STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pds5bSister chromatid cohesion protein PDS5-like protein B. (1464 aa)    
Predicted Functional Partners:
Smc3
Structural maintenance of chromosomes protein 3.
   
 0.975
Nipbl
Nipped-B protein.
   
 0.943
GW7_21809
Cohesin subunit SA-1.
   
 0.932
Stag2
Cohesin subunit SA-2.
   
 0.915
GW7_16414
Wings apart-like protein-like protein.
   
 0.900
GW7_09882
Wings apart-like protein-like protein.
   
 0.900
GW7_14334
Wings apart-like protein-like protein.
   
 0.900
GW7_05382
Wings apart-like protein-like protein.
   
 0.900
Smc1a
Structural maintenance of chromosomes protein.
   
 0.886
GW7_06250
Structural maintenance of chromosomes protein 1A.
   
 0.886
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.