STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_21242Regulation of nuclear pre-mRNA domain-containing protein 1B. (246 aa)    
Predicted Functional Partners:
POLR2A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.930
Rpap2
RNA polymerase II-associated protein 2.
   
 0.920
Rprd1a
Regulation of nuclear pre-mRNA domain-containing protein 1A.
  
 
0.913
GW7_06258
DNA-directed RNA polymerase II subunit RPB2.
   
 0.911
GW7_04804
Protein Dom3Z.
    
 
 0.856
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 0.833
GW7_05801
Regulation of nuclear pre-mRNA domain-containing protein 2.
    
 0.829
POLR2I
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.823
Polr2d
DNA-directed RNA polymerase II subunit RPB4.
    
 0.817
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.810
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.