STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Soga1DUF4482 domain-containing protein. (1970 aa)    
Predicted Functional Partners:
Amz1
Archaemetzincin-1.
      
 0.681
Xkr6
XK-related protein.
      
 0.569
GW7_04129
Tubulin-specific chaperone D.
      
 0.561
Itfg1
T-cell immunomodulatory protein.
      
 0.544
Mapk8ip3
C-jun-amino-terminal kinase-interacting protein 3.
   
  
 0.543
Gpr155
Integral membrane protein GPR155.
      
 0.538
Ttc29
Tetratricopeptide repeat protein 29.
      
 0.400
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.