Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Col6a2 | Efemp2 | G5C7V8 | G5B6I8 | Collagen alpha-2(VI) chain. | EGF-containing fibulin-like extracellular matrix protein 2. | 0.551 |
Col6a2 | GW7_01890 | G5C7V8 | G5ASC0 | Collagen alpha-2(VI) chain. | Paired mesoderm homeobox protein 2. | 0.565 |
Col6a2 | POSTN | G5C7V8 | G5C7K7 | Collagen alpha-2(VI) chain. | Periostin isoform 4. | 0.468 |
Col6a2 | Prss35 | G5C7V8 | G5B8B6 | Collagen alpha-2(VI) chain. | Inactive serine protease 35. | 0.470 |
Col6a2 | Vgll3 | G5C7V8 | G5BGL9 | Collagen alpha-2(VI) chain. | Transcription cofactor vestigial-like protein 3. | 0.451 |
Efemp2 | Col6a2 | G5B6I8 | G5C7V8 | EGF-containing fibulin-like extracellular matrix protein 2. | Collagen alpha-2(VI) chain. | 0.551 |
Efemp2 | GW7_01890 | G5B6I8 | G5ASC0 | EGF-containing fibulin-like extracellular matrix protein 2. | Paired mesoderm homeobox protein 2. | 0.599 |
Efemp2 | POSTN | G5B6I8 | G5C7K7 | EGF-containing fibulin-like extracellular matrix protein 2. | Periostin isoform 4. | 0.411 |
Efemp2 | Prss35 | G5B6I8 | G5B8B6 | EGF-containing fibulin-like extracellular matrix protein 2. | Inactive serine protease 35. | 0.403 |
Efemp2 | Vgll3 | G5B6I8 | G5BGL9 | EGF-containing fibulin-like extracellular matrix protein 2. | Transcription cofactor vestigial-like protein 3. | 0.583 |
GW7_01890 | Col6a2 | G5ASC0 | G5C7V8 | Paired mesoderm homeobox protein 2. | Collagen alpha-2(VI) chain. | 0.565 |
GW7_01890 | Efemp2 | G5ASC0 | G5B6I8 | Paired mesoderm homeobox protein 2. | EGF-containing fibulin-like extracellular matrix protein 2. | 0.599 |
GW7_01890 | POSTN | G5ASC0 | G5C7K7 | Paired mesoderm homeobox protein 2. | Periostin isoform 4. | 0.451 |
GW7_01890 | Prss35 | G5ASC0 | G5B8B6 | Paired mesoderm homeobox protein 2. | Inactive serine protease 35. | 0.406 |
GW7_01890 | Vgll3 | G5ASC0 | G5BGL9 | Paired mesoderm homeobox protein 2. | Transcription cofactor vestigial-like protein 3. | 0.565 |
POSTN | Col6a2 | G5C7K7 | G5C7V8 | Periostin isoform 4. | Collagen alpha-2(VI) chain. | 0.468 |
POSTN | Efemp2 | G5C7K7 | G5B6I8 | Periostin isoform 4. | EGF-containing fibulin-like extracellular matrix protein 2. | 0.411 |
POSTN | GW7_01890 | G5C7K7 | G5ASC0 | Periostin isoform 4. | Paired mesoderm homeobox protein 2. | 0.451 |
POSTN | Prss35 | G5C7K7 | G5B8B6 | Periostin isoform 4. | Inactive serine protease 35. | 0.408 |
Prss35 | Col6a2 | G5B8B6 | G5C7V8 | Inactive serine protease 35. | Collagen alpha-2(VI) chain. | 0.470 |
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