Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bace1 | Bace2 | G5BHK2 | G5C5D1 | Beta-secretase 1; Belongs to the peptidase A1 family. | Beta-secretase 2; Belongs to the peptidase A1 family. | 0.901 |
Bace1 | Rtn3 | G5BHK2 | G5B6G5 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.961 |
Bace1 | Rtn4 | G5BHK2 | G5B8W2 | Beta-secretase 1; Belongs to the peptidase A1 family. | Reticulon. | 0.964 |
Bace2 | Bace1 | G5C5D1 | G5BHK2 | Beta-secretase 2; Belongs to the peptidase A1 family. | Beta-secretase 1; Belongs to the peptidase A1 family. | 0.901 |
Bace2 | Rtn3 | G5C5D1 | G5B6G5 | Beta-secretase 2; Belongs to the peptidase A1 family. | Reticulon. | 0.942 |
Bace2 | Rtn4 | G5C5D1 | G5B8W2 | Beta-secretase 2; Belongs to the peptidase A1 family. | Reticulon. | 0.938 |
GW7_08766 | Rtn4 | G5BBJ7 | G5B8W2 | Nogo-B receptor. | Reticulon. | 0.696 |
GW7_09782 | RTN4IP1 | G5C288 | G5BMN5 | Translocation protein SEC63-like protein. | Reticulon-4-interacting protein 1, mitochondrial. | 0.451 |
GW7_09782 | Rtn3 | G5C288 | G5B6G5 | Translocation protein SEC63-like protein. | Reticulon. | 0.700 |
GW7_09782 | Rtn4 | G5C288 | G5B8W2 | Translocation protein SEC63-like protein. | Reticulon. | 0.700 |
GW7_13225 | MAG | G5BLJ0 | G5BXJ3 | Reticulon-4 receptor-like 2. | Myelin-associated glycoprotein isoform b. | 0.586 |
GW7_13225 | Rtn4 | G5BLJ0 | G5B8W2 | Reticulon-4 receptor-like 2. | Reticulon. | 0.678 |
MAG | GW7_13225 | G5BXJ3 | G5BLJ0 | Myelin-associated glycoprotein isoform b. | Reticulon-4 receptor-like 2. | 0.586 |
MAG | Rtn3 | G5BXJ3 | G5B6G5 | Myelin-associated glycoprotein isoform b. | Reticulon. | 0.496 |
MAG | Rtn4 | G5BXJ3 | G5B8W2 | Myelin-associated glycoprotein isoform b. | Reticulon. | 0.810 |
MAG | Rtn4r | G5BXJ3 | G5CA31 | Myelin-associated glycoprotein isoform b. | Reticulon-4 receptor. | 0.730 |
MAG | Rtn4rl1 | G5BXJ3 | G5BCU7 | Myelin-associated glycoprotein isoform b. | Reticulon-4 receptor-like 1. | 0.430 |
RTN4IP1 | GW7_09782 | G5BMN5 | G5C288 | Reticulon-4-interacting protein 1, mitochondrial. | Translocation protein SEC63-like protein. | 0.451 |
RTN4IP1 | Rtn4 | G5BMN5 | G5B8W2 | Reticulon-4-interacting protein 1, mitochondrial. | Reticulon. | 0.696 |
Rtn3 | Bace1 | G5B6G5 | G5BHK2 | Reticulon. | Beta-secretase 1; Belongs to the peptidase A1 family. | 0.961 |
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