CSE1L protein (Heterocephalus glaber) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CSE1L

Exportin-2 isoform 1. (971 aa)

Predicted Functional Partners:

Kpna3

0.966

Xpo1

0.835

Ran

0.755

GW7_03171

0.755

GW7_08373

0.755

GW7_21616

0.755

Kpnb1

0.752

GW7_05154

0.723

Xpo5

0.720

GW7_00775

0.714

Your Current Organism:

Heterocephalus glaber

NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSE1L	GW7_00775	G5B9N4	G5ARJ8	Exportin-2 isoform 1.	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	0.714
CSE1L	GW7_03171	G5B9N4	G5AWP8	Exportin-2 isoform 1.	Putative G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family.	0.755
CSE1L	GW7_05154	G5B9N4	G5CB92	Exportin-2 isoform 1.	E3 SUMO-protein ligase RanBP2.	0.723
CSE1L	GW7_08373	G5B9N4	G5AYK8	Exportin-2 isoform 1.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.755
CSE1L	GW7_21616	G5B9N4	G5BV01	Exportin-2 isoform 1.	GTP-binding nuclear protein Ran.	0.755
CSE1L	Kpna3	G5B9N4	G5B9Z4	Exportin-2 isoform 1.	Importin subunit alpha; Functions in nuclear protein import.	0.966
CSE1L	Kpnb1	G5B9N4	G5BY29	Exportin-2 isoform 1.	Importin subunit beta-1.	0.752
CSE1L	Ran	G5B9N4	G5AWP7	Exportin-2 isoform 1.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.755
CSE1L	Xpo1	G5B9N4	G5C1Y9	Exportin-2 isoform 1.	Exportin-1.	0.835
CSE1L	Xpo5	G5B9N4	G5BNM9	Exportin-2 isoform 1.	Exportin-5.	0.720
GW7_00775	CSE1L	G5ARJ8	G5B9N4	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Exportin-2 isoform 1.	0.714
GW7_00775	GW7_03171	G5ARJ8	G5AWP8	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Putative G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family.	0.842
GW7_00775	GW7_05154	G5ARJ8	G5CB92	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	E3 SUMO-protein ligase RanBP2.	0.724
GW7_00775	GW7_08373	G5ARJ8	G5AYK8	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.849
GW7_00775	GW7_21616	G5ARJ8	G5BV01	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	GTP-binding nuclear protein Ran.	0.849
GW7_00775	Kpnb1	G5ARJ8	G5BY29	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Importin subunit beta-1.	0.669
GW7_00775	Ran	G5ARJ8	G5AWP7	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.849
GW7_00775	Xpo1	G5ARJ8	G5C1Y9	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Exportin-1.	0.724
GW7_00775	Xpo5	G5ARJ8	G5BNM9	Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.	Exportin-5.	0.746
GW7_03171	CSE1L	G5AWP8	G5B9N4	Putative G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family.	Exportin-2 isoform 1.	0.755