Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GW7_07359 | GW7_17289 | G5B324 | G5BW54 | LIM domain-binding protein 2. | Transcription factor E2-alpha. | 0.846 |
GW7_07359 | GW7_21576 | G5B324 | G5B156 | LIM domain-binding protein 2. | Transcription factor 4. | 0.612 |
GW7_07359 | Msc | G5B324 | G5BAU4 | LIM domain-binding protein 2. | Musculin. | 0.479 |
GW7_07359 | Tcf12 | G5B324 | G5B124 | LIM domain-binding protein 2. | Transcription factor 12. | 0.612 |
GW7_17289 | GW7_07359 | G5BW54 | G5B324 | Transcription factor E2-alpha. | LIM domain-binding protein 2. | 0.846 |
GW7_17289 | GW7_21576 | G5BW54 | G5B156 | Transcription factor E2-alpha. | Transcription factor 4. | 0.529 |
GW7_17289 | Ldb1 | G5BW54 | G5CAG6 | Transcription factor E2-alpha. | LIM domain-binding protein 1. | 0.853 |
GW7_17289 | Msc | G5BW54 | G5BAU4 | Transcription factor E2-alpha. | Musculin. | 0.591 |
GW7_17289 | Tcf12 | G5BW54 | G5B124 | Transcription factor E2-alpha. | Transcription factor 12. | 0.542 |
GW7_21576 | GW7_07359 | G5B156 | G5B324 | Transcription factor 4. | LIM domain-binding protein 2. | 0.612 |
GW7_21576 | GW7_17289 | G5B156 | G5BW54 | Transcription factor 4. | Transcription factor E2-alpha. | 0.529 |
GW7_21576 | Ldb1 | G5B156 | G5CAG6 | Transcription factor 4. | LIM domain-binding protein 1. | 0.720 |
GW7_21576 | Msc | G5B156 | G5BAU4 | Transcription factor 4. | Musculin. | 0.540 |
Hes6 | Msc | G5BHH5 | G5BAU4 | Transcription cofactor HES-6. | Musculin. | 0.471 |
Ldb1 | GW7_17289 | G5CAG6 | G5BW54 | LIM domain-binding protein 1. | Transcription factor E2-alpha. | 0.853 |
Ldb1 | GW7_21576 | G5CAG6 | G5B156 | LIM domain-binding protein 1. | Transcription factor 4. | 0.720 |
Ldb1 | Msc | G5CAG6 | G5BAU4 | LIM domain-binding protein 1. | Musculin. | 0.479 |
Ldb1 | Tcf12 | G5CAG6 | G5B124 | LIM domain-binding protein 1. | Transcription factor 12. | 0.720 |
Msc | GW7_07359 | G5BAU4 | G5B324 | Musculin. | LIM domain-binding protein 2. | 0.479 |
Msc | GW7_17289 | G5BAU4 | G5BW54 | Musculin. | Transcription factor E2-alpha. | 0.591 |
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