Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCL9 | Ctcf | G5BBL4 | G5C665 | B-cell CLL/lymphoma 9 protein. | Transcriptional repressor CTCF. | 0.411 |
BCL9 | Ctnnb1 | G5BBL4 | G5ALX2 | B-cell CLL/lymphoma 9 protein. | Catenin beta-1. | 0.784 |
BCL9 | GW7_06873 | G5BBL4 | G5B0M0 | B-cell CLL/lymphoma 9 protein. | Junction plakoglobin. | 0.601 |
BCL9 | GW7_13507 | G5BBL4 | G5APP9 | B-cell CLL/lymphoma 9 protein. | Lipid phosphate phosphohydrolase 3. | 0.451 |
BCL9 | GW7_17076 | G5BBL4 | G5BN10 | B-cell CLL/lymphoma 9 protein. | Transcription factor 7. | 0.416 |
BCL9 | GW7_19934 | G5BBL4 | G5BZX9 | B-cell CLL/lymphoma 9 protein. | Macrophage-stimulating protein receptor. | 0.555 |
BCL9 | Lef1 | G5BBL4 | G5AQL1 | B-cell CLL/lymphoma 9 protein. | Lymphoid enhancer-binding factor 1. | 0.448 |
BCL9 | Met | G5BBL4 | G5ARC8 | B-cell CLL/lymphoma 9 protein. | Hepatocyte growth factor receptor. | 0.555 |
BCL9 | Pygo1 | G5BBL4 | G5B2Q0 | B-cell CLL/lymphoma 9 protein. | Pygopus-like protein 1. | 0.515 |
BCL9 | Pygo2 | G5BBL4 | G5BDD9 | B-cell CLL/lymphoma 9 protein. | Pygopus-like protein 2. | 0.577 |
Ctcf | BCL9 | G5C665 | G5BBL4 | Transcriptional repressor CTCF. | B-cell CLL/lymphoma 9 protein. | 0.411 |
Ctnnb1 | BCL9 | G5ALX2 | G5BBL4 | Catenin beta-1. | B-cell CLL/lymphoma 9 protein. | 0.784 |
Ctnnb1 | GW7_06873 | G5ALX2 | G5B0M0 | Catenin beta-1. | Junction plakoglobin. | 0.960 |
Ctnnb1 | GW7_17076 | G5ALX2 | G5BN10 | Catenin beta-1. | Transcription factor 7. | 0.946 |
Ctnnb1 | GW7_19934 | G5ALX2 | G5BZX9 | Catenin beta-1. | Macrophage-stimulating protein receptor. | 0.473 |
Ctnnb1 | Lef1 | G5ALX2 | G5AQL1 | Catenin beta-1. | Lymphoid enhancer-binding factor 1. | 0.999 |
Ctnnb1 | Met | G5ALX2 | G5ARC8 | Catenin beta-1. | Hepatocyte growth factor receptor. | 0.952 |
Ctnnb1 | Pygo1 | G5ALX2 | G5B2Q0 | Catenin beta-1. | Pygopus-like protein 1. | 0.591 |
GW7_06873 | BCL9 | G5B0M0 | G5BBL4 | Junction plakoglobin. | B-cell CLL/lymphoma 9 protein. | 0.601 |
GW7_06873 | Ctnnb1 | G5B0M0 | G5ALX2 | Junction plakoglobin. | Catenin beta-1. | 0.960 |
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