Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GW7_11553 | GW7_15762 | G5BC58 | G5BB83 | Tetratricopeptide repeat protein 1. | E3 ubiquitin-protein ligase NRDP1. | 0.459 |
GW7_11553 | HSPA4 | G5BC58 | G5BN06 | Tetratricopeptide repeat protein 1. | Heat shock 70 kDa protein 4. | 0.504 |
GW7_11553 | PPP1R7 | G5BC58 | G5C3R5 | Tetratricopeptide repeat protein 1. | Protein phosphatase 1 regulatory subunit 7. | 0.529 |
GW7_11553 | Tomm70 | G5BC58 | G5BUU3 | Tetratricopeptide repeat protein 1. | Mitochondrial import receptor subunit TOM70. | 0.408 |
GW7_15762 | GW7_11553 | G5BB83 | G5BC58 | E3 ubiquitin-protein ligase NRDP1. | Tetratricopeptide repeat protein 1. | 0.459 |
GW7_15762 | Tomm70 | G5BB83 | G5BUU3 | E3 ubiquitin-protein ligase NRDP1. | Mitochondrial import receptor subunit TOM70. | 0.549 |
HSPA4 | GW7_11553 | G5BN06 | G5BC58 | Heat shock 70 kDa protein 4. | Tetratricopeptide repeat protein 1. | 0.504 |
HSPA4 | Tomm70 | G5BN06 | G5BUU3 | Heat shock 70 kDa protein 4. | Mitochondrial import receptor subunit TOM70. | 0.749 |
PPP1R7 | GW7_11553 | G5C3R5 | G5BC58 | Protein phosphatase 1 regulatory subunit 7. | Tetratricopeptide repeat protein 1. | 0.529 |
Tomm70 | GW7_11553 | G5BUU3 | G5BC58 | Mitochondrial import receptor subunit TOM70. | Tetratricopeptide repeat protein 1. | 0.408 |
Tomm70 | GW7_15762 | G5BUU3 | G5BB83 | Mitochondrial import receptor subunit TOM70. | E3 ubiquitin-protein ligase NRDP1. | 0.549 |
Tomm70 | HSPA4 | G5BUU3 | G5BN06 | Mitochondrial import receptor subunit TOM70. | Heat shock 70 kDa protein 4. | 0.749 |