Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ank1 | Ank3 | G5C636 | G5BXS3 | Ankyrin-1. | Ankyrin-3. | 0.919 |
Ank1 | TIAM1 | G5C636 | G5BEA7 | Ankyrin-1. | T-lymphoma invasion and metastasis-inducing protein 1. | 0.924 |
Ank1 | Vav2 | G5C636 | G5B8I3 | Ankyrin-1. | Guanine nucleotide exchange factor VAV2. | 0.420 |
Ank3 | Ank1 | G5BXS3 | G5C636 | Ankyrin-3. | Ankyrin-1. | 0.919 |
Ank3 | TIAM1 | G5BXS3 | G5BEA7 | Ankyrin-3. | T-lymphoma invasion and metastasis-inducing protein 1. | 0.925 |
Ank3 | Vav2 | G5BXS3 | G5B8I3 | Ankyrin-3. | Guanine nucleotide exchange factor VAV2. | 0.423 |
Cdc42 | Pard3 | G5BI03 | G5BI20 | Cell division control protein 42-like protein. | Partitioning defective 3-like protein. | 0.930 |
Cdc42 | Rac2 | G5BI03 | G5BAV0 | Cell division control protein 42-like protein. | Ras-related C3 botulinum toxin substrate 2. | 0.937 |
Cdc42 | TIAM1 | G5BI03 | G5BEA7 | Cell division control protein 42-like protein. | T-lymphoma invasion and metastasis-inducing protein 1. | 0.954 |
Cdc42 | Vav2 | G5BI03 | G5B8I3 | Cell division control protein 42-like protein. | Guanine nucleotide exchange factor VAV2. | 0.967 |
GW7_03073 | RAP1B | G5BUU9 | G5BBH0 | Ras-related protein Rap-1b. | Ras-related protein Rap-1b isoform 1. | 0.900 |
GW7_03073 | TIAM1 | G5BUU9 | G5BEA7 | Ras-related protein Rap-1b. | T-lymphoma invasion and metastasis-inducing protein 1. | 0.923 |
GW7_03073 | Vav2 | G5BUU9 | G5B8I3 | Ras-related protein Rap-1b. | Guanine nucleotide exchange factor VAV2. | 0.919 |
Hras | Nras | G5C480 | G5ATE8 | GTPase HRas. | GTPase NRas. | 0.901 |
Hras | TIAM1 | G5C480 | G5BEA7 | GTPase HRas. | T-lymphoma invasion and metastasis-inducing protein 1. | 0.923 |
Nras | Hras | G5ATE8 | G5C480 | GTPase NRas. | GTPase HRas. | 0.901 |
Nras | TIAM1 | G5ATE8 | G5BEA7 | GTPase NRas. | T-lymphoma invasion and metastasis-inducing protein 1. | 0.923 |
Pard3 | Cdc42 | G5BI20 | G5BI03 | Partitioning defective 3-like protein. | Cell division control protein 42-like protein. | 0.930 |
Pard3 | Rac2 | G5BI20 | G5BAV0 | Partitioning defective 3-like protein. | Ras-related C3 botulinum toxin substrate 2. | 0.918 |
Pard3 | TIAM1 | G5BI20 | G5BEA7 | Partitioning defective 3-like protein. | T-lymphoma invasion and metastasis-inducing protein 1. | 0.941 |
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