STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Edf1Endothelial differentiation-related factor 1. (111 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.984
RPS20
40S ribosomal protein S20 isoform 1.
   
 
 0.918
RPL35
60S ribosomal protein L35.
   
 
 0.902
RPS9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
   0.901
Rack1
Guanine nucleotide-binding protein subunit beta-2-like 1.
   
 
 0.896
Rps21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 
 0.884
Rpl32
60S ribosomal protein L32.
   
 
 0.872
Rps5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
   0.869
GW7_19120
28S ribosomal protein S10, mitochondrial.
   
 
 0.861
Rps29
40S ribosomal protein S29.
   
 
 0.861
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.