Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GW7_04192 | GW7_19431 | G5B7H4 | G5BEL0 | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin thioesterase OTUB1. | 0.589 |
GW7_04192 | RPS27A | G5B7H4 | G5B8W4 | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-40S ribosomal protein S27a. | 0.774 |
GW7_04192 | TRAF6 | G5B7H4 | G5B132 | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.758 |
GW7_04321 | GW7_19431 | G5ANH9 | G5BEL0 | Ubiquitin-conjugating enzyme E2 N. | Ubiquitin thioesterase OTUB1. | 0.589 |
GW7_04321 | RPS27A | G5ANH9 | G5B8W4 | Ubiquitin-conjugating enzyme E2 N. | Ubiquitin-40S ribosomal protein S27a. | 0.774 |
GW7_04321 | TRAF6 | G5ANH9 | G5B132 | Ubiquitin-conjugating enzyme E2 N. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.758 |
GW7_07069 | GW7_19431 | G5B2C5 | G5BEL0 | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin thioesterase OTUB1. | 0.589 |
GW7_07069 | RPS27A | G5B2C5 | G5B8W4 | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-40S ribosomal protein S27a. | 0.774 |
GW7_07069 | TRAF6 | G5B2C5 | G5B132 | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.758 |
GW7_19431 | GW7_04192 | G5BEL0 | G5B7H4 | Ubiquitin thioesterase OTUB1. | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | 0.589 |
GW7_19431 | GW7_04321 | G5BEL0 | G5ANH9 | Ubiquitin thioesterase OTUB1. | Ubiquitin-conjugating enzyme E2 N. | 0.589 |
GW7_19431 | GW7_07069 | G5BEL0 | G5B2C5 | Ubiquitin thioesterase OTUB1. | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | 0.589 |
GW7_19431 | GW7_21313 | G5BEL0 | G5AZ78 | Ubiquitin thioesterase OTUB1. | Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. | 0.645 |
GW7_19431 | RPS27A | G5BEL0 | G5B8W4 | Ubiquitin thioesterase OTUB1. | Ubiquitin-40S ribosomal protein S27a. | 0.693 |
GW7_19431 | Rnf128 | G5BEL0 | G5B3R8 | Ubiquitin thioesterase OTUB1. | E3 ubiquitin-protein ligase RNF128. | 0.638 |
GW7_19431 | TRAF6 | G5BEL0 | G5B132 | Ubiquitin thioesterase OTUB1. | TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. | 0.630 |
GW7_19431 | Ube2d1 | G5BEL0 | G5BLB6 | Ubiquitin thioesterase OTUB1. | Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. | 0.728 |
GW7_19431 | Ube2n | G5BEL0 | G5B011 | Ubiquitin thioesterase OTUB1. | Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. | 0.589 |
GW7_19431 | Usp8 | G5BEL0 | G5C8T1 | Ubiquitin thioesterase OTUB1. | Ubiquitin carboxyl-terminal hydrolase 8; Belongs to the peptidase C19 family. | 0.640 |
GW7_21313 | GW7_19431 | G5AZ78 | G5BEL0 | Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin thioesterase OTUB1. | 0.645 |
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