Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Brip1 | Exo1 | G5BAX6 | G5BL24 | Fanconi anemia group J protein. | Exonuclease 1. | 0.827 |
Brip1 | Fan1 | G5BAX6 | G5B6I0 | Fanconi anemia group J protein. | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | 0.495 |
Brip1 | GW7_01393 | G5BAX6 | G5B411 | Fanconi anemia group J protein. | Proliferating cell nuclear antigen. | 0.512 |
Brip1 | Mlh1 | G5BAX6 | G5BR58 | Fanconi anemia group J protein. | DNA mismatch repair protein Mlh1. | 0.997 |
Brip1 | Msh4 | G5BAX6 | G5AXL7 | Fanconi anemia group J protein. | MutS protein-like protein 4. | 0.422 |
Brip1 | Msh6 | G5BAX6 | G5ANB4 | Fanconi anemia group J protein. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.409 |
Brip1 | Pms2 | G5BAX6 | G5BF34 | Fanconi anemia group J protein. | Mismatch repair endonuclease PMS2. | 0.972 |
Exo1 | Brip1 | G5BL24 | G5BAX6 | Exonuclease 1. | Fanconi anemia group J protein. | 0.827 |
Exo1 | GW7_01393 | G5BL24 | G5B411 | Exonuclease 1. | Proliferating cell nuclear antigen. | 0.917 |
Exo1 | GW7_10881 | G5BL24 | G5BK74 | Exonuclease 1. | DNA mismatch repair protein Msh3. | 0.835 |
Exo1 | MSH2 | G5BL24 | G5ANB1 | Exonuclease 1. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.986 |
Exo1 | Mlh1 | G5BL24 | G5BR58 | Exonuclease 1. | DNA mismatch repair protein Mlh1. | 0.987 |
Exo1 | Msh4 | G5BL24 | G5AXL7 | Exonuclease 1. | MutS protein-like protein 4. | 0.835 |
Exo1 | Msh5 | G5BL24 | G5C3G1 | Exonuclease 1. | MutS protein-like protein 5. | 0.827 |
Exo1 | Msh6 | G5BL24 | G5ANB4 | Exonuclease 1. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.980 |
Exo1 | Pms2 | G5BL24 | G5BF34 | Exonuclease 1. | Mismatch repair endonuclease PMS2. | 0.981 |
Fan1 | Brip1 | G5B6I0 | G5BAX6 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | Fanconi anemia group J protein. | 0.495 |
Fan1 | GW7_10881 | G5B6I0 | G5BK74 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | DNA mismatch repair protein Msh3. | 0.400 |
Fan1 | MSH2 | G5B6I0 | G5ANB1 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.477 |
Fan1 | Mlh1 | G5B6I0 | G5BR58 | Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. | DNA mismatch repair protein Mlh1. | 0.983 |
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