STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_15830Partitioning defective 3-like protein. (274 aa)    
Predicted Functional Partners:
Pard6a
Partitioning defective 6-like protein alpha.
    
 0.936
Pard3
Partitioning defective 3-like protein.
 
     0.878
Pard6b
Partitioning defective 6-like protein beta.
    
 0.787
Pard6g
Partitioning defective 6-like protein gamma.
    
 0.784
Cdh5
Cadherin-5.
    
 
 0.749
Pard3b
Partitioning defective 3-like protein B.
 
  
 
 0.643
RASSF8
Ras association domain-containing protein 8 isoform b.
    
 
 0.575
Mpp5
MAGUK p55 subfamily member 5; Belongs to the MAGUK family.
    
 0.553
RPS27A
Ubiquitin-40S ribosomal protein S27a.
   
  0.546
Traf3ip1
TRAF3-interacting protein 1.
    
 0.527
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.