Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Crtc2 | Ep300 | G5BES1 | G5BVC4 | CREB-regulated transcription coactivator 2. | Histone acetyltransferase p300. | 0.853 |
Crtc2 | GW7_03627 | G5BES1 | G5B1G6 | CREB-regulated transcription coactivator 2. | CREB-binding protein. | 0.491 |
Crtc2 | GW7_14531 | G5BES1 | G5C634 | CREB-regulated transcription coactivator 2. | CREB-binding protein. | 0.491 |
Crtc2 | GW7_20104 | G5BES1 | G5BJK7 | CREB-regulated transcription coactivator 2. | Cyclic AMP-responsive element-binding protein 1. | 0.895 |
Ep300 | Crtc2 | G5BVC4 | G5BES1 | Histone acetyltransferase p300. | CREB-regulated transcription coactivator 2. | 0.853 |
Ep300 | GW7_03627 | G5BVC4 | G5B1G6 | Histone acetyltransferase p300. | CREB-binding protein. | 0.859 |
Ep300 | GW7_14531 | G5BVC4 | G5C634 | Histone acetyltransferase p300. | CREB-binding protein. | 0.878 |
Ep300 | GW7_20104 | G5BVC4 | G5BJK7 | Histone acetyltransferase p300. | Cyclic AMP-responsive element-binding protein 1. | 0.722 |
Ep300 | Tp53 | G5BVC4 | G5B5D6 | Histone acetyltransferase p300. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.992 |
GW7_03627 | Crtc2 | G5B1G6 | G5BES1 | CREB-binding protein. | CREB-regulated transcription coactivator 2. | 0.491 |
GW7_03627 | Ep300 | G5B1G6 | G5BVC4 | CREB-binding protein. | Histone acetyltransferase p300. | 0.859 |
GW7_03627 | GW7_17945 | G5B1G6 | G5BVC5 | CREB-binding protein. | Histone acetyltransferase p300. | 0.874 |
GW7_03627 | GW7_17946 | G5B1G6 | G5BVC6 | CREB-binding protein. | Histone acetyltransferase p300. | 0.877 |
GW7_03627 | GW7_20104 | G5B1G6 | G5BJK7 | CREB-binding protein. | Cyclic AMP-responsive element-binding protein 1. | 0.844 |
GW7_03627 | Tp53 | G5B1G6 | G5B5D6 | CREB-binding protein. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.941 |
GW7_11667 | GW7_20104 | G5C5B0 | G5BJK7 | CREB-regulated transcription coactivator 1. | Cyclic AMP-responsive element-binding protein 1. | 0.726 |
GW7_14531 | Crtc2 | G5C634 | G5BES1 | CREB-binding protein. | CREB-regulated transcription coactivator 2. | 0.491 |
GW7_14531 | Ep300 | G5C634 | G5BVC4 | CREB-binding protein. | Histone acetyltransferase p300. | 0.878 |
GW7_14531 | GW7_17945 | G5C634 | G5BVC5 | CREB-binding protein. | Histone acetyltransferase p300. | 0.961 |
GW7_14531 | GW7_17946 | G5C634 | G5BVC6 | CREB-binding protein. | Histone acetyltransferase p300. | 0.952 |
page 1 of 3