STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_06349Phosphatidylinositol-glycan-specific phospholipase D. (763 aa)    
Predicted Functional Partners:
Crtac1
Cartilage acidic protein 1.
      
 0.513
Aldh5a1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.511
ALPL
Alkaline phosphatase.
     
 0.498
Tgfb1
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.482
Pld1
Phospholipase.
      
 0.472
Pld2
Phospholipase.
      
 0.471
Vcl
Vinculin.
   
 0.467
Cd109
CD109 antigen.
   
  0.456
GW7_10665
Integrin beta; Belongs to the integrin beta chain family.
   
 0.449
Itgb7
Integrin beta; Belongs to the integrin beta chain family.
   
 0.449
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.