Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLIP3 | Chst8 | G5BK14 | G5BXM1 | CAP-Gly domain-containing linker protein 3. | Carbohydrate sulfotransferase. | 0.549 |
CLIP3 | GW7_00149 | G5BK14 | G5AWB4 | CAP-Gly domain-containing linker protein 3. | Putative ubiquitin carboxyl-terminal hydrolase CYLD. | 0.491 |
CLIP3 | GW7_00949 | G5BK14 | G5B433 | CAP-Gly domain-containing linker protein 3. | Putative ubiquitin carboxyl-terminal hydrolase CYLD. | 0.491 |
CLIP3 | GW7_03181 | G5BK14 | G5AXP6 | CAP-Gly domain-containing linker protein 3. | Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial. | 0.533 |
CLIP3 | GW7_07456 | G5BK14 | G5BGD1 | CAP-Gly domain-containing linker protein 3. | Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family. | 0.627 |
CLIP3 | GW7_12044 | G5BK14 | G5C064 | CAP-Gly domain-containing linker protein 3. | Ras-related protein Rab-31. | 0.541 |
CLIP3 | GW7_15235 | G5BK14 | G5AW00 | CAP-Gly domain-containing linker protein 3. | Putative ubiquitin carboxyl-terminal hydrolase CYLD. | 0.491 |
CLIP3 | GW7_18425 | G5BK14 | G5BXP2 | CAP-Gly domain-containing linker protein 3. | Amyloid-like protein 1. | 0.577 |
CLIP3 | GW7_21200 | G5BK14 | G5B949 | CAP-Gly domain-containing linker protein 3. | Putative ubiquitin carboxyl-terminal hydrolase CYLD. | 0.491 |
CLIP3 | Zbtb7c | G5BK14 | G5B882 | CAP-Gly domain-containing linker protein 3. | Zinc finger and BTB domain-containing protein 7C. | 0.552 |
Chst8 | CLIP3 | G5BXM1 | G5BK14 | Carbohydrate sulfotransferase. | CAP-Gly domain-containing linker protein 3. | 0.549 |
Chst8 | GW7_03181 | G5BXM1 | G5AXP6 | Carbohydrate sulfotransferase. | Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial. | 0.452 |
Chst8 | GW7_07456 | G5BXM1 | G5BGD1 | Carbohydrate sulfotransferase. | Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family. | 0.551 |
Chst8 | GW7_18425 | G5BXM1 | G5BXP2 | Carbohydrate sulfotransferase. | Amyloid-like protein 1. | 0.533 |
Chst8 | Zbtb7c | G5BXM1 | G5B882 | Carbohydrate sulfotransferase. | Zinc finger and BTB domain-containing protein 7C. | 0.513 |
GW7_00149 | CLIP3 | G5AWB4 | G5BK14 | Putative ubiquitin carboxyl-terminal hydrolase CYLD. | CAP-Gly domain-containing linker protein 3. | 0.491 |
GW7_00949 | CLIP3 | G5B433 | G5BK14 | Putative ubiquitin carboxyl-terminal hydrolase CYLD. | CAP-Gly domain-containing linker protein 3. | 0.491 |
GW7_03181 | CLIP3 | G5AXP6 | G5BK14 | Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial. | CAP-Gly domain-containing linker protein 3. | 0.533 |
GW7_03181 | Chst8 | G5AXP6 | G5BXM1 | Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial. | Carbohydrate sulfotransferase. | 0.452 |
GW7_07456 | CLIP3 | G5BGD1 | G5BK14 | Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family. | CAP-Gly domain-containing linker protein 3. | 0.627 |
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