Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cd2 | Cd28 | G5BFJ5 | G5C9P3 | T-cell surface antigen CD2. | T-cell-specific surface glycoprotein CD28. | 0.708 |
Cd2 | Cd40lg | G5BFJ5 | G5ANA5 | T-cell surface antigen CD2. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.558 |
Cd2 | Ctla4 | G5BFJ5 | G5BKP2 | T-cell surface antigen CD2. | Cytotoxic T-lymphocyte protein 4. | 0.466 |
Cd2 | GW7_11053 | G5BFJ5 | G5B2F1 | T-cell surface antigen CD2. | T-lymphocyte activation antigen CD86. | 0.536 |
Cd2 | Icos | G5BFJ5 | G5BKP1 | T-cell surface antigen CD2. | Inducible T-cell costimulator. | 0.718 |
Cd28 | Cd2 | G5C9P3 | G5BFJ5 | T-cell-specific surface glycoprotein CD28. | T-cell surface antigen CD2. | 0.708 |
Cd28 | Cd40lg | G5C9P3 | G5ANA5 | T-cell-specific surface glycoprotein CD28. | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | 0.750 |
Cd28 | Ctla4 | G5C9P3 | G5BKP2 | T-cell-specific surface glycoprotein CD28. | Cytotoxic T-lymphocyte protein 4. | 0.776 |
Cd28 | GW7_11053 | G5C9P3 | G5B2F1 | T-cell-specific surface glycoprotein CD28. | T-lymphocyte activation antigen CD86. | 0.954 |
Cd28 | Icos | G5C9P3 | G5BKP1 | T-cell-specific surface glycoprotein CD28. | Inducible T-cell costimulator. | 0.800 |
Cd28 | Icoslg | G5C9P3 | G5BG16 | T-cell-specific surface glycoprotein CD28. | ICOS ligand. | 0.952 |
Cd28 | Klrg1 | G5C9P3 | G5BPM2 | T-cell-specific surface glycoprotein CD28. | Killer cell lectin-like receptor subfamily G member 1. | 0.483 |
Cd28 | Pik3cb | G5C9P3 | G5AQ99 | T-cell-specific surface glycoprotein CD28. | Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta isoform; Belongs to the PI3/PI4-kinase family. | 0.924 |
Cd28 | Pik3r1 | G5C9P3 | G5C7Q9 | T-cell-specific surface glycoprotein CD28. | Phosphatidylinositol 3-kinase regulatory subunit alpha. | 0.987 |
Cd40lg | Cd2 | G5ANA5 | G5BFJ5 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | T-cell surface antigen CD2. | 0.558 |
Cd40lg | Cd28 | G5ANA5 | G5C9P3 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | T-cell-specific surface glycoprotein CD28. | 0.750 |
Cd40lg | Ctla4 | G5ANA5 | G5BKP2 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Cytotoxic T-lymphocyte protein 4. | 0.557 |
Cd40lg | GW7_11053 | G5ANA5 | G5B2F1 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | T-lymphocyte activation antigen CD86. | 0.705 |
Cd40lg | Icos | G5ANA5 | G5BKP1 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | Inducible T-cell costimulator. | 0.981 |
Cd40lg | Icoslg | G5ANA5 | G5BG16 | CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. | ICOS ligand. | 0.671 |
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