STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sytl5Synaptotagmin-like protein 5. (753 aa)    
Predicted Functional Partners:
Rab27b
Ras-related protein Rab-27B.
   
 
 0.740
Rab27a
Ras-related protein Rab-27A.
   
 
 0.723
GW7_13987
Intersectin-2.
     
 0.693
Rims2
Regulating synaptic membrane exocytosis protein 2.
     
0.574
RAB3A
Ras-related protein Rab-3A.
   
 0.545
GW7_16288
Intersectin-1.
     
 0.503
GW7_13292
Ras-related protein Rab-3D.
   
 0.485
GW7_04900
Syntaxin-3; Belongs to the syntaxin family.
    
 0.452
GW7_13199
Peripheral plasma membrane protein CASK.
     
 0.446
Cask
Peripheral plasma membrane protein CASK.
     
 0.446
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.