STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Eif2dLigatin. (575 aa)    
Predicted Functional Partners:
Aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
  0.863
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.855
Rack1
Guanine nucleotide-binding protein subunit beta-2-like 1.
    
   0.803
Denr
Density-regulated protein; Belongs to the DENR family.
    
 
 0.700
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
 
 0.674
RPS20
40S ribosomal protein S20 isoform 1.
    
 
 0.664
RPS7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.658
RPS19
40S ribosomal protein S19.
   
   0.646
RPS9
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
    
   0.646
Mcts1
Malignant T cell amplified sequence 1.
    
 
0.622
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.