STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABPAGA-binding protein alpha chain. (503 aa)    
Predicted Functional Partners:
GW7_21164
GA-binding protein subunit beta-1.
   
 0.870
GW7_02918
GA-binding protein subunit beta-1.
   
 0.870
GW7_00843
GA-binding protein subunit beta-1.
   
 0.870
Gabpb1
GA-binding protein subunit beta-1.
   
 0.870
Gabpb2
GA-binding protein subunit beta-2.
   
 0.862
Atp5j
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
      
 0.678
GW7_01964
Transcription factor A, mitochondrial.
   
 
 0.617
GW7_13836
Sex hormone-binding globulin.
   
  
 0.570
GW7_06412
Uncharacterized protein.
      
 0.543
Ppargc1a
Peroxisome proliferator-activated receptor gamma coactivator 1-alpha.
   
 0.501
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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