STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Usp38Ubiquitin carboxyl-terminal hydrolase 38; Belongs to the peptidase C19 family. (1039 aa)    
Predicted Functional Partners:
Wdr48
WD repeat-containing protein 48.
   
 0.752
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
 0.750
GW7_18105
Dystrophia myotonica WD repeat-containing protein.
   
 0.637
GW7_07671
Dystrophia myotonica WD repeat-containing protein.
   
 0.637
INPP4B
Type II inositol 3,4-bisphosphate 4-phosphatase.
      
 0.575
Herc2
Putative E3 ubiquitin-protein ligase HERC2.
    
   0.553
Hhip
Hedgehog-interacting protein.
      
 0.544
Asb8
Ankyrin repeat and SOCS box protein 8.
    
 
 0.538
ABCE1
ATP-binding cassette sub-family E member 1.
      
 0.533
Fancd2
Fanconi anemia group D2 protein.
    
 0.527
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.