STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AgmatAgmatinase, mitochondrial; Belongs to the arginase family. (340 aa)    
Predicted Functional Partners:
Azin2
Arginine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.965
Srm
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.963
ODC1
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.949
Aoc1
Amine oxidase.
     
 0.928
Sat2
Diamine acetyltransferase 2.
  
 
 0.923
Sat1
Diamine acetyltransferase 1.
  
 
 0.923
OAT
Ornithine aminotransferase, mitochondrial isoform 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.908
OTC
Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.838
Hal
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
 
 0.800
Asl
Argininosuccinate lyase.
     
 0.796
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.