STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fcf1rRNA-processing protein FCF1-like protein. (197 aa)    
Predicted Functional Partners:
UTP11L
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.918
EMG1
Ribosomal RNA small subunit methyltransferase NEP1.
   
 0.880
Utp3
Something about silencing protein 10.
   
 0.876
Nop56
Nucleolar protein 56.
   
 0.862
GW7_04255
RNA 3'-terminal phosphate cyclase-like protein.
   
 0.855
Tbl3
Transducin beta-like protein 3.
   
 0.853
Wdr36
WD repeat-containing protein 36.
   
 0.853
Rrp9
U3 small nucleolar RNA-interacting protein 2.
   
 0.843
WDR43
WD repeat-containing protein 43.
   
 0.843
Wdr46
WD repeat-containing protein 46.
   
 0.838
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.