STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tm4sf1Transmembrane 4 L6 family member 1. (225 aa)    
Predicted Functional Partners:
Nr5a2
Nuclear receptor subfamily 5 group A member 2.
   
  
 0.633
GW7_11891
dCTP pyrophosphatase 1.
      
 0.540
GW7_09632
Myosin-X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.539
Ddr1
Tyrosine-protein kinase receptor.
      
 0.514
LZIC
Protein LZIC.
      
 0.452
AMIGO2
Amphoterin-induced protein 2.
      
 0.445
Tspan1
Tetraspanin.
      
 0.410
Gja4
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
  
  
 0.406
GW7_00600
Cysteine-rich with EGF-like domain protein 2.
      
 0.400
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.