Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dusp12 | Olfml2b | G5BWG4 | G5BU43 | Dual specificity protein phosphatase 12. | Olfactomedin-like protein 2B. | 0.549 |
GW7_09516 | GW7_18334 | G5BIB0 | G5BU44 | Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. | Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. | 0.681 |
GW7_09516 | Olfml2b | G5BIB0 | G5BU43 | Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. | Olfactomedin-like protein 2B. | 0.461 |
GW7_09516 | Tor3a | G5BIB0 | G5C7J8 | Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. | Torsin-3A. | 0.463 |
GW7_12653 | Olfml2b | G5BNR8 | G5BU43 | Tudor domain-containing protein 5. | Olfactomedin-like protein 2B. | 0.461 |
GW7_12653 | Tor3a | G5BNR8 | G5C7J8 | Tudor domain-containing protein 5. | Torsin-3A. | 0.463 |
GW7_16688 | Olfml2b | G5C7B9 | G5BU43 | A disintegrin and metalloproteinase with thrombospondin motifs 2. | Olfactomedin-like protein 2B. | 0.410 |
GW7_18334 | GW7_09516 | G5BU44 | G5BIB0 | Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. | Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. | 0.681 |
GW7_18334 | GW7_18336 | G5BU44 | G5BU46 | Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. | Uncharacterized protein. | 0.778 |
GW7_18334 | NPHS2 | G5BU44 | G5B7W3 | Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. | Podocin. | 0.558 |
GW7_18334 | Olfml2b | G5BU44 | G5BU43 | Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. | Olfactomedin-like protein 2B. | 0.463 |
GW7_18334 | Soat1 | G5BU44 | G5C7J5 | Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. | Sterol O-acyltransferase 1; Belongs to the membrane-bound acyltransferase family. | 0.544 |
GW7_18334 | Tor3a | G5BU44 | G5C7J8 | Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. | Torsin-3A. | 0.468 |
GW7_18336 | GW7_18334 | G5BU46 | G5BU44 | Uncharacterized protein. | Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. | 0.778 |
GW7_18336 | NPHS2 | G5BU46 | G5B7W3 | Uncharacterized protein. | Podocin. | 0.404 |
GW7_18336 | Olfml2b | G5BU46 | G5BU43 | Uncharacterized protein. | Olfactomedin-like protein 2B. | 0.556 |
GW7_18336 | Soat1 | G5BU46 | G5C7J5 | Uncharacterized protein. | Sterol O-acyltransferase 1; Belongs to the membrane-bound acyltransferase family. | 0.451 |
GW7_18336 | Tor3a | G5BU46 | G5C7J8 | Uncharacterized protein. | Torsin-3A. | 0.463 |
NPHS2 | GW7_18334 | G5B7W3 | G5BU44 | Podocin. | Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein. | 0.558 |
NPHS2 | GW7_18336 | G5B7W3 | G5BU46 | Podocin. | Uncharacterized protein. | 0.404 |
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