STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAMP8Vesicle-associated membrane protein 8. (101 aa)    
Predicted Functional Partners:
Snap29
Synaptosomal-associated protein 29.
   
 0.996
GW7_13987
Intersectin-2.
     
 0.948
Stx6
Syntaxin-6; Belongs to the syntaxin family.
    
 0.941
GW7_14640
Vesicle transport through interaction with t-SNAREs-like protein 1A.
   
 0.936
Gak
Cyclin G-associated kinase.
   
 
  0.931
STX5
Syntaxin-5 isoform 1; Belongs to the syntaxin family.
    
 0.921
GW7_05027
Syntaxin-17.
   
 0.920
Stx7
Syntaxin-7; Belongs to the syntaxin family.
   
 0.916
Vps39
Vam6/Vps39-like protein.
    
 
 0.902
GW7_03191
Vacuolar protein sorting-associated protein 16-like protein.
    
 
 0.899
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.