STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP8Neutrophil collagenase preproprotein. (470 aa)    
Predicted Functional Partners:
Timp2
Metalloproteinase inhibitor 2.
   
 0.785
GW7_19095
Triggering receptor expressed on myeloid cells 2.
   
  
 0.689
GW7_08109
Myeloblastin; Belongs to the peptidase S1 family.
   
 0.652
Elane
Neutrophil elastase; Belongs to the peptidase S1 family.
   
 0.652
GW7_11548
Plasminogen; Belongs to the peptidase S1 family.
   
 0.607
Mmp7
Matrilysin.
  
0.586
SERPINH1
Serpin H1; Belongs to the serpin family.
   
 0.582
GW7_09276
Defensin-5.
   
  
 0.561
Dcn
Decorin; May affect the rate of fibrils formation.
   
 0.545
GW7_08098
Basigin.
    
 0.535
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.