Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Abhd14b | Ttc38 | G5AXN4 | G5BVB1 | Abhydrolase domain-containing protein 14B. | Tetratricopeptide repeat protein 38. | 0.452 |
CLIP3 | Ttc38 | G5BK14 | G5BVB1 | CAP-Gly domain-containing linker protein 3. | Tetratricopeptide repeat protein 38. | 0.450 |
DDX28 | Ttc38 | G5C685 | G5BVB1 | Putative ATP-dependent RNA helicase DDX28. | Tetratricopeptide repeat protein 38. | 0.455 |
Fam118a | Trmu | G5BKI2 | G5BVB3 | Protein FAM118A. | Mitochondrial tRNA-specific 2-thiouridylase 1. | 0.486 |
Fam118a | Ttc38 | G5BKI2 | G5BVB1 | Protein FAM118A. | Tetratricopeptide repeat protein 38. | 0.543 |
Trmu | Fam118a | G5BVB3 | G5BKI2 | Mitochondrial tRNA-specific 2-thiouridylase 1. | Protein FAM118A. | 0.486 |
Trmu | Ttc38 | G5BVB3 | G5BVB1 | Mitochondrial tRNA-specific 2-thiouridylase 1. | Tetratricopeptide repeat protein 38. | 0.541 |
Ttc38 | Abhd14b | G5BVB1 | G5AXN4 | Tetratricopeptide repeat protein 38. | Abhydrolase domain-containing protein 14B. | 0.452 |
Ttc38 | CLIP3 | G5BVB1 | G5BK14 | Tetratricopeptide repeat protein 38. | CAP-Gly domain-containing linker protein 3. | 0.450 |
Ttc38 | DDX28 | G5BVB1 | G5C685 | Tetratricopeptide repeat protein 38. | Putative ATP-dependent RNA helicase DDX28. | 0.455 |
Ttc38 | Fam118a | G5BVB1 | G5BKI2 | Tetratricopeptide repeat protein 38. | Protein FAM118A. | 0.543 |
Ttc38 | Trmu | G5BVB1 | G5BVB3 | Tetratricopeptide repeat protein 38. | Mitochondrial tRNA-specific 2-thiouridylase 1. | 0.541 |