Col2a1 protein (Heterocephalus glaber) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

Col2a1

Collagen alpha-1(II) chain. (1488 aa)

Predicted Functional Partners:

ITGB1

0.926

Itgav

0.914

Gp6

0.912

Sdc1

0.910

GW7_04819

0.790

Itga2

0.748

Itga2b

0.746

GW7_21190

0.734

Itga10

0.722

Itgb4

0.709

Your Current Organism:

Heterocephalus glaber

NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Col2a1	GW7_04819	G5BWD5	G5C3I9	Collagen alpha-1(II) chain.	HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.	0.790
Col2a1	GW7_21190	G5BWD5	G5AYR1	Collagen alpha-1(II) chain.	Collagen alpha-1(XI) chain.	0.734
Col2a1	Gp6	G5BWD5	G5CBH0	Collagen alpha-1(II) chain.	Platelet glycoprotein VI.	0.912
Col2a1	ITGB1	G5BWD5	G5C5C6	Collagen alpha-1(II) chain.	Integrin beta; Belongs to the integrin beta chain family.	0.926
Col2a1	Itga10	G5BWD5	G5BBM7	Collagen alpha-1(II) chain.	Integrin alpha-10; Belongs to the integrin alpha chain family.	0.722
Col2a1	Itga2	G5BWD5	G5BQX9	Collagen alpha-1(II) chain.	Integrin alpha-2; Belongs to the integrin alpha chain family.	0.748
Col2a1	Itga2b	G5BWD5	G5BIZ9	Collagen alpha-1(II) chain.	Integrin alpha-IIb; Belongs to the integrin alpha chain family.	0.746
Col2a1	Itgav	G5BWD5	G5BJZ9	Collagen alpha-1(II) chain.	Integrin alpha-V; Belongs to the integrin alpha chain family.	0.914
Col2a1	Itgb4	G5BWD5	G5BNA6	Collagen alpha-1(II) chain.	Integrin beta.	0.709
Col2a1	Sdc1	G5BWD5	G5AZA4	Collagen alpha-1(II) chain.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.910
GW7_04819	Col2a1	G5C3I9	G5BWD5	HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.	Collagen alpha-1(II) chain.	0.790
GW7_04819	GW7_21190	G5C3I9	G5AYR1	HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.	Collagen alpha-1(XI) chain.	0.407
GW7_04819	Gp6	G5C3I9	G5CBH0	HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.	Platelet glycoprotein VI.	0.451
GW7_21190	Col2a1	G5AYR1	G5BWD5	Collagen alpha-1(XI) chain.	Collagen alpha-1(II) chain.	0.734
GW7_21190	GW7_04819	G5AYR1	G5C3I9	Collagen alpha-1(XI) chain.	HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.	0.407
Gp6	Col2a1	G5CBH0	G5BWD5	Platelet glycoprotein VI.	Collagen alpha-1(II) chain.	0.912
Gp6	GW7_04819	G5CBH0	G5C3I9	Platelet glycoprotein VI.	HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.	0.451
Gp6	Itga2	G5CBH0	G5BQX9	Platelet glycoprotein VI.	Integrin alpha-2; Belongs to the integrin alpha chain family.	0.701
Gp6	Itga2b	G5CBH0	G5BIZ9	Platelet glycoprotein VI.	Integrin alpha-IIb; Belongs to the integrin alpha chain family.	0.665
ITGB1	Col2a1	G5C5C6	G5BWD5	Integrin beta; Belongs to the integrin beta chain family.	Collagen alpha-1(II) chain.	0.926