Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Col11a2 | GW7_10116 | G5BB00 | G5BNE4 | Collagen alpha-2(XI) chain. | Uncharacterized protein. | 0.535 |
Col11a2 | Hspg2 | G5BB00 | G5BI06 | Collagen alpha-2(XI) chain. | Basement membrane-specific heparan sulfate proteoglycan core protein. | 0.500 |
Col11a2 | Nucks1 | G5BB00 | G5BX47 | Collagen alpha-2(XI) chain. | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | 0.452 |
GW7_10116 | Col11a2 | G5BNE4 | G5BB00 | Uncharacterized protein. | Collagen alpha-2(XI) chain. | 0.535 |
GW7_10116 | Hspg2 | G5BNE4 | G5BI06 | Uncharacterized protein. | Basement membrane-specific heparan sulfate proteoglycan core protein. | 0.436 |
GW7_10116 | Nucks1 | G5BNE4 | G5BX47 | Uncharacterized protein. | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | 0.538 |
GW7_19346 | Nucks1 | G5BL80 | G5BX47 | Proline-serine-threonine phosphatase-interacting protein 2. | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | 0.451 |
GW7_20951 | Nucks1 | G5ARM0 | G5BX47 | Phosphorylated adapter RNA export protein. | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | 0.456 |
Hspg2 | Col11a2 | G5BI06 | G5BB00 | Basement membrane-specific heparan sulfate proteoglycan core protein. | Collagen alpha-2(XI) chain. | 0.500 |
Hspg2 | GW7_10116 | G5BI06 | G5BNE4 | Basement membrane-specific heparan sulfate proteoglycan core protein. | Uncharacterized protein. | 0.436 |
Hspg2 | Nucks1 | G5BI06 | G5BX47 | Basement membrane-specific heparan sulfate proteoglycan core protein. | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | 0.452 |
Nucks1 | Col11a2 | G5BX47 | G5BB00 | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | Collagen alpha-2(XI) chain. | 0.452 |
Nucks1 | GW7_10116 | G5BX47 | G5BNE4 | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | Uncharacterized protein. | 0.538 |
Nucks1 | GW7_19346 | G5BX47 | G5BL80 | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | Proline-serine-threonine phosphatase-interacting protein 2. | 0.451 |
Nucks1 | GW7_20951 | G5BX47 | G5ARM0 | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | Phosphorylated adapter RNA export protein. | 0.456 |
Nucks1 | Hspg2 | G5BX47 | G5BI06 | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | Basement membrane-specific heparan sulfate proteoglycan core protein. | 0.452 |
Nucks1 | PM20D1 | G5BX47 | G5BX50 | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | Putative carboxypeptidase PM20D1. | 0.560 |
Nucks1 | Phax | G5BX47 | G5BHU4 | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | Phosphorylated adapter RNA export protein. | 0.456 |
Nucks1 | RAB7L1 | G5BX47 | G5BX48 | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | Ras-related protein Rab-7L1 isoform 1. | 0.613 |
Nucks1 | SLC41A1 | G5BX47 | G5BX49 | Nuclear ubiquitous casein and cyclin-dependent kinases substrate. | Solute carrier family 41 member 1. | 0.594 |
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