GW7_12994 protein (Heterocephalus glaber) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GW7_12994

Regulator of G-protein signaling 11. (476 aa)

Predicted Functional Partners:

GW7_04217

0.960

GNAT1

0.850

Rgs9bp

0.829

PDE6G

0.821

Gnat3

0.757

Cct5

0.723

Rgs7bp

0.680

Gnb3

0.665

GW7_09344

0.647

Gnai2

0.646

Your Current Organism:

Heterocephalus glaber

NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cct5	GW7_04217	G5B710	G5C9D3	T-complex protein 1 subunit epsilon.	Guanine nucleotide-binding protein subunit beta-5.	0.976
Cct5	GW7_12994	G5B710	G5BXX7	T-complex protein 1 subunit epsilon.	Regulator of G-protein signaling 11.	0.723
Cct5	Gnb3	G5B710	G5CAR2	T-complex protein 1 subunit epsilon.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	0.676
GNAT1	GW7_04217	G5BZY4	G5C9D3	Guanine nucleotide-binding protein G(T) subunit alpha-1.	Guanine nucleotide-binding protein subunit beta-5.	0.763
GNAT1	GW7_09344	G5BZY4	G5BMR4	Guanine nucleotide-binding protein G(T) subunit alpha-1.	Guanine nucleotide-binding protein G(O) subunit alpha.	0.403
GNAT1	GW7_12994	G5BZY4	G5BXX7	Guanine nucleotide-binding protein G(T) subunit alpha-1.	Regulator of G-protein signaling 11.	0.850
GNAT1	Gnai2	G5BZY4	G5BZY6	Guanine nucleotide-binding protein G(T) subunit alpha-1.	Guanine nucleotide-binding protein G(I), alpha-2 subunit.	0.428
GNAT1	Gnat3	G5BZY4	G5BVU6	Guanine nucleotide-binding protein G(T) subunit alpha-1.	Guanine nucleotide-binding protein G(T) subunit alpha-3.	0.615
GNAT1	Gnb3	G5BZY4	G5CAR2	Guanine nucleotide-binding protein G(T) subunit alpha-1.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	0.787
GNAT1	PDE6G	G5BZY4	G5BJ67	Guanine nucleotide-binding protein G(T) subunit alpha-1.	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.	0.995
GNAT1	Rgs9bp	G5BZY4	G5BL33	Guanine nucleotide-binding protein G(T) subunit alpha-1.	Regulator of G-protein signaling 9-binding protein.	0.539
GW7_04217	Cct5	G5C9D3	G5B710	Guanine nucleotide-binding protein subunit beta-5.	T-complex protein 1 subunit epsilon.	0.976
GW7_04217	GNAT1	G5C9D3	G5BZY4	Guanine nucleotide-binding protein subunit beta-5.	Guanine nucleotide-binding protein G(T) subunit alpha-1.	0.763
GW7_04217	GW7_09344	G5C9D3	G5BMR4	Guanine nucleotide-binding protein subunit beta-5.	Guanine nucleotide-binding protein G(O) subunit alpha.	0.761
GW7_04217	GW7_12994	G5C9D3	G5BXX7	Guanine nucleotide-binding protein subunit beta-5.	Regulator of G-protein signaling 11.	0.960
GW7_04217	Gnai2	G5C9D3	G5BZY6	Guanine nucleotide-binding protein subunit beta-5.	Guanine nucleotide-binding protein G(I), alpha-2 subunit.	0.699
GW7_04217	Gnat3	G5C9D3	G5BVU6	Guanine nucleotide-binding protein subunit beta-5.	Guanine nucleotide-binding protein G(T) subunit alpha-3.	0.717
GW7_04217	Gnb3	G5C9D3	G5CAR2	Guanine nucleotide-binding protein subunit beta-5.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	0.485
GW7_04217	PDE6G	G5C9D3	G5BJ67	Guanine nucleotide-binding protein subunit beta-5.	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.	0.525
GW7_04217	Rgs7bp	G5C9D3	G5BNS6	Guanine nucleotide-binding protein subunit beta-5.	Regulator of G-protein signaling 7-binding protein.	0.742