STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mansc1MANSC domain-containing protein 1. (415 aa)    
Predicted Functional Partners:
Tmem171
Transmembrane protein 171.
      
 0.677
Fam134c
Protein FAM134C.
    
 
 0.654
Fam189a2
Protein FAM189A2.
    
 0.544
GW7_11116
Transmembrane protein 206.
      
 0.541
R3hcc1l
Growth inhibition and differentiation-related protein 88.
  
  
  0.477
GW7_05927
CKLF-like MARVEL transmembrane domain-containing protein 6.
  
     0.435
Coprs
Cooperator of PRMT5.
  
     0.427
GW7_17250
Lysosome-associated membrane glycoprotein 3.
  
   0.420
CMTM6
CKLF-like MARVEL transmembrane domain-containing protein 6.
  
     0.419
GW7_17218
PDZ domain-containing protein 2.
  
 
   0.416
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.