Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Chd1 | GW7_07504 | G5BDL1 | G5BHZ4 | Chromodomain-helicase-DNA-binding protein 1. | Lysine-specific histone demethylase 1. | 0.482 |
Chd1 | GW7_16033 | G5BDL1 | G5BYR3 | Chromodomain-helicase-DNA-binding protein 1. | Ras-responsive element-binding protein 1. | 0.431 |
GW7_07504 | Chd1 | G5BHZ4 | G5BDL1 | Lysine-specific histone demethylase 1. | Chromodomain-helicase-DNA-binding protein 1. | 0.482 |
GW7_07504 | GW7_16033 | G5BHZ4 | G5BYR3 | Lysine-specific histone demethylase 1. | Ras-responsive element-binding protein 1. | 0.453 |
GW7_16033 | Chd1 | G5BYR3 | G5BDL1 | Ras-responsive element-binding protein 1. | Chromodomain-helicase-DNA-binding protein 1. | 0.431 |
GW7_16033 | GW7_07504 | G5BYR3 | G5BHZ4 | Ras-responsive element-binding protein 1. | Lysine-specific histone demethylase 1. | 0.453 |
GW7_16033 | IRF1 | G5BYR3 | G5ASP5 | Ras-responsive element-binding protein 1. | Interferon regulatory factor. | 0.406 |
IRF1 | GW7_16033 | G5ASP5 | G5BYR3 | Interferon regulatory factor. | Ras-responsive element-binding protein 1. | 0.406 |