STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_11689SUMO-conjugating enzyme UBC9-B. (132 aa)    
Predicted Functional Partners:
GW7_05154
E3 SUMO-protein ligase RanBP2.
   
 0.994
Sumo1
Small ubiquitin-related modifier 1.
   
 0.969
Rangap1
Ran GTPase-activating protein 1.
   
 0.967
GW7_09948
E3 SUMO-protein ligase PIAS1.
    
 0.867
SAE1
SUMO-activating enzyme subunit 1 isoform a.
   
 0.855
GW7_00749
SUMO-activating enzyme subunit 1.
   
 0.855
IPO13
Importin-13.
   
 
 0.854
GW7_00042
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.853
Ube2v1
Transmembrane protein 189.
   
 0.853
TARDBP
TAR DNA-binding protein 43.
   
  0.852
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.