STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Uba7Ubiquitin-like modifier-activating enzyme 7; Belongs to the ubiquitin-activating E1 family. (977 aa)    
Predicted Functional Partners:
RPS27A
Ubiquitin-40S ribosomal protein S27a.
   
 0.988
Trip12
Putative E3 ubiquitin-protein ligase TRIP12.
   
 0.949
Uba6
Ubiquitin-like modifier-activating enzyme 6.
  
 
0.933
Uba1
Ubiquitin-like modifier-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
  
  
 
0.920
Ube2l6
Ubiquitin/ISG15-conjugating enzyme E2 L6.
   
 0.855
Ube2g2
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.828
Birc6
Baculoviral IAP repeat-containing protein 6.
   
 0.798
Ube2r2
Ubiquitin-conjugating enzyme E2 R2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.797
Cdc34
Ubiquitin-conjugating enzyme E2 R1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.797
Ube2s
Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.793
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.