STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zcchc7Zinc finger CCHC domain-containing protein 7. (338 aa)    
Predicted Functional Partners:
SKIV2L2
Superkiller viralicidic activity 2-like 2.
   
 
 0.947
Papd7
DNA polymerase sigma.
   
 
 0.890
Papd5
PAP-associated domain-containing protein 5.
   
 
 0.890
EXOSC10
Exosome component 10 isoform 2.
   
 
 0.710
GW7_04803
Helicase SKI2W.
   
 
 0.687
GW7_01338
Poly(A) polymerase gamma.
      
 0.678
EXOSC1
3'-5' exoribonuclease CSL4-like protein.
   
  
 0.649
Exosc4
Exosome complex exonuclease RRP41.
   
  
 0.615
Zfc3h1
Zinc finger C3H1 domain-containing protein.
   
  
 0.597
GW7_03125
Zinc finger CCHC domain-containing protein 8.
      
 0.593
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.