STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Otol1Otolin-1. (463 aa)    
Predicted Functional Partners:
GW7_16899
Otogelin.
   
  
 0.692
Katnal2
Katanin p60 ATPase-containing subunit A-like 2.
      
 0.586
Angel2
Angel-like protein 2.
      
 0.583
GW7_08309
Otoconin-90.
      
 0.565
Lypd6b
Ly6/PLAUR domain-containing protein 6B.
      
 0.544
GW7_19352
Alpha-2,8-sialyltransferase 8E; Belongs to the glycosyltransferase 29 family.
      
 0.542
GW7_01580
Uncharacterized protein.
      
 0.542
GW7_14539
Otopetrin-1.
      
 0.539
Gpcpd1
Putative glycerophosphodiester phosphodiesterase 5.
      
 0.536
OPTN
Optineurin.
      
 0.478
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.